Workshop on TB drugs: Lessons for the antibacterial community

Dear All:

​I listened with interest to the 19 July 2017 FDA Workshop entitled “Development of New Tuberculosis Treatment Regimens– Scientific and Clinical Trial Design Considerations.” Most of the materials from the meeting are available online (see link below my signature). 

I was interested in this workshop both because I want to see new TB drugs progress but also because I wanted to listen for insights from TB-related strategies that would help with the problems we face in evaluating some antibacterial antibiotic combinations.

My more detailed notes are found below my signature but let me summarize here my two main insights.

Science of TB. Here I was delighted to learn that assays for a cell wall component (lipoarabinomannan, LAM) hold real promise as a way to get real-time insight into mycobacterial load and response to therapy. Very cool!

Science of Combinations. Sadly, I did not learn any clever new tricks for evaluating combinations in an efficient fashion. Outside of beta-lactam + beta-lactamase (BL-BLI) combinations, the core problem of showing the contribution of each component remains difficult. A certain amount of this can be addressed with preclinical and Phase 1 data, but a simple path to clear Phase 3 data remains elusive. This is an ongoing problem for certain types of add-on therapies (e.g., immune modifiers) and is not really a regulatory issue — there is simply no reason to use an add-on if you can’t show the benefit. This is going to require further contemplation!

In any event, many thanks as well to our colleagues at FDA for both holding this meeting and for making it possible to listen from a distance – the quality of the streaming was excellent, including the opportunity to participate in a fire alarm!

Best wishes, –jr

John H. Rex, MD | Chief Medical Officer, F2G Ltd. | Chief Strategy Officer, CARB-X | Expert-in-Residence, Wellcome Trust | Follow me on Twitter: @JohnRex_NewAbx

Upcoming events of note:

  • 5-9 Sep 2017: ASM-ESCMID conference on antibiotic R&D, including the CARB-X + GARDP Antibiotic Bootcamp
  • 13 Sep 2017 (DC): FDA-CDRH workshop on diagnostic devices for detecting antimicrobial susceptibility & resistance
  • 4-8 Oct 2017 (San Diego): IDWeek
  • 11-16 Mar 2018 (Ventura Beach): Gordon Research Conference on Antibacterial Discovery
  • 21-24 Apr 2018 (Madrid): ECCMID
  • 7-11 Jun 2018 (Atlanta): ASM Microbe

More detailed notes

Materials online: https://www.fda.gov/Drugs/NewsEvents/ucm548365.htm

The morning talks covered overall need, the current pipeline, preclinical tools, PK-PD, diagnostics, and data standardization. These decks speak well without commentary and I will offer only two further points, both from Debra Hanna’s talk. First, she mentioned that CPTR have submitted data to FDA showing excellent inter-laboratory reproducibility of hollow-fiber systems. Second, she described used of assays for lipoarabinomannan (LAM), a cell wall component of TB. As with assays such as galactomannan for aspergillosis, it appears that this marker offers both diagnostic potential as well as a real-time way to assess the impact of therapy on bioburden.

The afternoon’s integrated discussions of the problem of evaluating the component elements of a combination regimen were my greater interest.As you know, combination therapy is fundamental to TB treatment and I hoped for discussions at the workshop that might generate ideas for development of antibacterial combinations. For avoidance of doubt, I am not talking about combinations such as beta-lactam + beta-lactamase inhibitors (BL-BLI) in which the BLI drops the MIC from (say) > 128 mg/L to 0.25 mg/L.

Rather, I am interested in the setting in which the new agent has an independent activity but can’t be tested on its own as monotherapy. This may follow for several reasons and brief monotherapy might be possible, but the overall effect is that the pivotal tests of the new agent must be done in combination with other drugs.

This, in turn, leads to the combination rule which says that you need to show how each individual component contributes to the combination. FDA highlighted this with their list of questions to the participants where the #1 questions for the morning and afternoon, respectively, were:

  • To what extent can nonclinical studies be used for demonstrating the contribution of each component of a new regimen before advancing to clinical studies?
  • To what extent can clinical studies be used for demonstrating the contribution of each component of a new regimen?

 Karen Higgins (FDA) gave a talk in which she provided an overview of the relevant regulatory framework:

  • Substantial evidence of effectiveness,
  • Accelerated vs. standard approval, and
  • The combination rule (21 CFR 300.50) + the 2013 Codevelopment Guidance

Although it was the talk from FDA that summarized the rules around combinations, you should not view this as a regulatory problem. It really is not — the regulatory statement of the need to show the contribution of each component is no more than common sense. If you have a standard of care therapy (SOC) that works reasonably well, then what you need is a demonstration that SOC + New is better than SOC alone. And, the definition of better needs to be clear and compelling!

Combined with the ideas from the following talks (Spigelman, Wells, Vernon, Starke), the following points stood out for me. I’ll foreshadow by saying that (frustratingly!) none of these ideas seemed to offer a powerful new insight for antibacterial development.

First and most fundamental, antibacterial development benefits greatly from the fact that definitive monotherapy is often possible where this simply is not a path for a new TB drug. Brief monotherapy for TB is at most possible in Phase 1 — after that a combination is required. Hence, compromises that might be accepted for a new TB drug will not be accepted for a new antibacterial.

Second, preclinical PK-PD predictions must be confirmed in man. The TB community has made great strides, especially with hollow-fiber systems and these data can contribute to the demonstration that each component plays a role, but you still need a clear .

Third, the fundamental design of the TB community’s Unified Development Pathway is at heart the same as we generally use for new antibacterial agents and reduces to a randomized non-inferiority study vs. a standard regimen in the UDR (usual drug resistance setting) plus a (randomized if possible) trial vs. best therapy in the MDR/XDR setting. This should sound very familiar!

Fourth, superiority-based add-on strategies can be pursued only so long as there are no good alternatives. But, once you have active choices it becomes harder and harder to rely on this approach – and recent experience shows that we’ve probably already reached a point with antibacterial agents where such trials cannot reliably be run. This is great for patients but hard for developers!

Finally, all of this leaves me still frustrated in my hunt for reliable ways to evaluate antibiotic alternatives that are not appropriate as monotherapy.We can borrow bits from here and there, but core problem remains hard. The prototypical example here for me would be a virulence inhibitor – such an agent does not have an MIC, is less (or not) amenable to PK-PD-based dose selection, and like new TB drugs fails the test of “Would you use this agent by itself?” In that setting, the workshop did not suggest a path other than showing some form of superiority when the agent is added to a properly dosed and otherwise active regimen. To my eye, this creates a very high-risk situation for developing such agents.

Dear All,
 
The IDWeek 2024 program committee is again seeking programs on novel antimicrobial agents and novel diagnostics for presentation in pipeline sessions! Here’s what is sought:

  • “Industry partners are invited to submit antimicrobials that are in preclinical stages of development (Phase II and III preferred) or recently approved after January 2024.
  • “The pipeline sessions will include antibacterials, antifungals, and antivirals (excluding COVID-19 and HIV).
  • “The committee also invites companies developing novel diagnostic technologies with a minimum of some preliminary proof of concept data to submit.” 

This is a great opportunity to tell the story of your development project! The deadline to submit is Wednesday, June 26 via the application portal. Any questions should be directed to program@idsociety.org. Please share this email with anyone you think might be interested in applying!
 
In addition, I’ll also note that those with a more general story to tell should look at the BugHub Stage (and the Global BugHub stage). Both BugHub variants seek “presentations that touch on your experience of working in infectious diseases and presentations that ultimately lead to a greater understanding of our diverse field” via a TED Talk-esque speech about your work. The deadline for applications is 26 June, the same as for the pipeline sessions.

I look forward to seeing you there! All best wishes, –jr

John H. Rex, MD | Chief Medical Officer, F2G Ltd. | Operating Partner, Advent Life Sciences. Follow me on Twitter: @JohnRex_NewAbx. See past newsletters and subscribe for the future: https://amr.solutions/blog/. All opinions are my own.

John’s Top Recurring Meetings

Virtual meetings are easy to attend, but regular attendance at annual in-person events is the key to building your network and gaining deeper insight. My personal favorites for such in-person meetings are below. Of particular value for developers are the AMR Conference and the ASM-ESCMID conference. Hope to see you there!

  • 27-30 April 2024 (Barcelona, Spain): 34th ECCMID, the annual meeting of the European Society for Clinical Microbiology and Infectious Diseases. Go here for details. 
  • 17-20 Sep 2024 (Porto, Portugal): ASM/ESCMID Joint Conference on Drug Development to Meet the Challenge of Antimicrobial Resistance. Go here for the meeting’s general website. You can’t register (yet) for the 2024 event, but save the date!
  • 16-20 Oct 2024 (Los Angeles, USA): IDWeek 2024, the annual meeting of the Infectious Diseases Society of America. Save the date! More details to come!
  • 25-26 February 2025 (Basel, Switzerland): The 9th AMR Conference 2025. Go here to register

Upcoming meetings of interest to the AMR community:

  • [NEW]  9 Apr 2024 (virtual, 830a-10a ET): GARDP’s next REVIVE webinar entitled “Progressing a discovery project – Criteria and challenges.” Register here.
  • [NEW] 9 Apr 2024 (virtual, 10a-1130a ET): CDC webinar “Impacts of Antimicrobial Resistance on Cancer Care.” Click here for details and to register.
  • 10-11 Apr 2024 (virtual): Sepsis Alliance AMR Conference, a 2-day conference focused on “Practical technologies to manage sepsis and counteract the expanding challenge of antimicrobial resistance.” Go here for details and to register.
  • 26 Apr 2024 (Barcelona, Spain): ESCMID workshop entitled “Using Data Science and Machine Learning for Infection Science: A Hands-on Introduction.” Click here to register or here for more details. 
  • 27-30 April 2024 (Barcelona, Spain): 34th ECCMID, the annual meeting of the European Society for Clinical Microbiology and Infectious Diseases. See Recurring Meetings list, above.
  • 26-31 May 2024 (Montreal, Canada): EDAR7, the McGill AMR Centre’s 7th edition of their Environmental Dimension of Antimicrobial Resistance conference. Go here for details; final abstract deadline is 21 Dec 2023.
  • 28-29 May 2024 (in person, Uppsala, Sweden): Uppsala Antibiotic Days, a broad-ranging 2-day program hosted by the Uppsala Antibiotic Center. Go here for details and to register.
  • [NEW] 30-31 May 2024 (face-to-face in Rockville, Maryland as well as online, 8.30-5.30p ET on 30 May, 9-2.40p on 31 May): NIAID-sponsored workshop entitled “Towards realizing the promise of adjunctive immune therapy for invasive fungal infections”. The agenda covers host immunity to invasive fungal infections, immune modulators in the context of fungal infections; and strategies for testing immune modulators as adjunctive therapy. Go here for more details and to register.
  • 9-13 June 2024 (in person, Ascona, Switzerland): “New Approaches to Combat Antibiotic-Resistant Bacteria, 2nd Edition” is a Sunday-Thursday residential workshop focused on the deep biology of AMR. Sponsored by NCCR AntiResist (a Swiss National Science Foundation consortium), the scientific program has the feel of a Gordon Conference. Space is limited, so you are encouraged to apply promptly — go here for details.
  • 13-17 June 2024 (Atlanta, Georgia): ASM Microbe, the annual meeting of the American Society for Microbiology. You can’t register yet, but you can go here for general details.
  • 17-20 Sep 2024 (Porto, Portugal): ASM/ESCMID Joint Conference on Drug Development to Meet the Challenge of Antimicrobial Resistance. See Recurring Meetings list, above.
  • 16-20 Oct 2024 (Los Angeles, USA): IDWeek 2024, the annual meeting of the Infectious Diseases Society of America. See Recurring Meetings list, above. 
  • 19-27 Oct 2024 (Annecy, France, residential in-person program): ICARe (Interdisciplinary Course on Antibiotics and Resistance). Now in its 8th year, Patrice Courvalin directs the program with the support of an all-star scientific committee and faculty. The resulting soup-to-nuts training covers all aspects of antimicrobials, is very intense, and routinely gets rave reviews! Seating is limited, so mark your calendars now if you are interested. Applications open in March 2024 — go here for more details.
  • 4-5 Dec 2024 (in person, Washington, DC): “Fungal Dx 2024: Fungal Diagnostics in Clinical Practice” is a 2-day in-person workshop organized by ISHAM‘s Fungal Diagnostics Working Group. The program and registration links are available at https://fungaldx.com/; the agenda is comprehensive and features an all-star global list of speakers.

Share

OHE £40k Policy Innovation Prize: AMR, anyone?

Dear All, One of your alert co-readers (Abigail Herron) pointed out to me the currently open call for applications for the OHE (Office of Health Economics) Innovation Policy Prize, a biennial £40k prize seeking “to promote thought leadership and solution-based theories around the big questions affecting the future of our industry.” Intriguingly for the AMR community, their

WHO call for data on pre-clinical antifungal R&D projects

Dear All, As part of their long-running project to maintain a useful view of the global antibacterial and antifungal pipelines, WHO yesterday announced a call for data on pre-clinical antifungal R&D projects. The scope is anything from Lead Optimization to pre-IND. Here are the links you need: The WHO webpage describing the call for data

GLG-AMR: AMR will lower global life expectancy by 1.8y. The fix pays for itself.

Dear All (moderately wonkish, so settle in for the ride — and the reason for the title of this newsletter will become obvious!), The GLG AMR (Global Leaders Group on Antimicrobial Resistance) released a report on 3 April 2024 providing recommendations for consideration by UN Member States in the outcome document of the High-Level Meeting (HLM) on

48,015 → 0: Antibacterial discovery is hard. Really, really hard.

Dear All (and with thanks to Patricia Bradford for co-authoring this newsletter), When you are seeking novelty, antibacterial discovery is hard … really, really, REALLY hard. And it gets even harder if you want activity vs. Gram-negative bacteria. As the latest proof of this, a paper from GARDP’s Blasco et al. describing use of an

Scroll to Top